Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nfkb1P25799 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.62■□□□□ 0.25
Nfkb1P25799 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.62■□□□□ 0.25
Nfkb1P25799 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Nfkb1P25799 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.62■□□□□ 0.25
Nfkb1P25799 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.62■□□□□ 0.25
Nfkb1P25799 Gm6296-201ENSMUST00000222599 943 ntBASIC16.62■□□□□ 0.25
Nfkb1P25799 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nfkb1P25799 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.62■□□□□ 0.25
Nfkb1P25799 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Nfkb1P25799 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Nfkb1P25799 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.62■□□□□ 0.25
Nfkb1P25799 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nfkb1P25799 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nfkb1P25799 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nfkb1P25799 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nfkb1P25799 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nfkb1P25799 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.61■□□□□ 0.25
Nfkb1P25799 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nfkb1P25799 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nfkb1P25799 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.61■□□□□ 0.25
Nfkb1P25799 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nfkb1P25799 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.61■□□□□ 0.25
Nfkb1P25799 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nfkb1P25799 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nfkb1P25799 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nfkb1P25799 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nfkb1P25799 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Nfkb1P25799 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nfkb1P25799 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nfkb1P25799 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nfkb1P25799 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nfkb1P25799 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nfkb1P25799 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nfkb1P25799 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nfkb1P25799 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.6■□□□□ 0.25
Nfkb1P25799 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nfkb1P25799 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nfkb1P25799 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.6■□□□□ 0.25
Nfkb1P25799 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.6■□□□□ 0.25
Nfkb1P25799 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nfkb1P25799 Gm6376-201ENSMUST00000209407 580 ntBASIC16.6■□□□□ 0.25
Nfkb1P25799 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.6■□□□□ 0.25
Nfkb1P25799 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nfkb1P25799 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nfkb1P25799 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nfkb1P25799 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nfkb1P25799 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nfkb1P25799 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nfkb1P25799 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nfkb1P25799 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nfkb1P25799 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nfkb1P25799 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nfkb1P25799 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nfkb1P25799 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nfkb1P25799 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nfkb1P25799 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nfkb1P25799 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nfkb1P25799 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nfkb1P25799 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nfkb1P25799 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.59■□□□□ 0.25
Nfkb1P25799 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.59■□□□□ 0.25
Nfkb1P25799 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.59■□□□□ 0.25
Nfkb1P25799 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Nfkb1P25799 Gm18195-201ENSMUST00000207604 706 ntBASIC16.59■□□□□ 0.25
Nfkb1P25799 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.59■□□□□ 0.25
Nfkb1P25799 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Nfkb1P25799 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nfkb1P25799 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Nfkb1P25799 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nfkb1P25799 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nfkb1P25799 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nfkb1P25799 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Nfkb1P25799 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nfkb1P25799 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.58■□□□□ 0.25
Nfkb1P25799 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nfkb1P25799 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nfkb1P25799 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nfkb1P25799 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.58■□□□□ 0.24
Nfkb1P25799 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nfkb1P25799 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Nfkb1P25799 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.58■□□□□ 0.24
Nfkb1P25799 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.58■□□□□ 0.24
Nfkb1P25799 Gm7506-201ENSMUST00000207758 815 ntBASIC16.58■□□□□ 0.24
Nfkb1P25799 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms