Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col8a2P25318 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col8a2P25318 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col8a2P25318 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col8a2P25318 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col8a2P25318 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col8a2P25318 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col8a2P25318 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col8a2P25318 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col8a2P25318 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col8a2P25318 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col8a2P25318 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.51□□□□□ -0.25
Col8a2P25318 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.51□□□□□ -0.25
Col8a2P25318 Gm12644-201ENSMUST00000119935 606 ntBASIC13.51□□□□□ -0.25
Col8a2P25318 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.51□□□□□ -0.25
Col8a2P25318 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.51□□□□□ -0.25
Col8a2P25318 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.51□□□□□ -0.25
Col8a2P25318 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.51□□□□□ -0.25
Col8a2P25318 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col8a2P25318 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.51□□□□□ -0.25
Col8a2P25318 Grk6-207ENSMUST00000225925 2769 ntBASIC13.51□□□□□ -0.25
Col8a2P25318 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.51□□□□□ -0.25
Col8a2P25318 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col8a2P25318 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.51□□□□□ -0.25
Col8a2P25318 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.5□□□□□ -0.25
Col8a2P25318 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Col8a2P25318 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.5□□□□□ -0.25
Col8a2P25318 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.5□□□□□ -0.25
Col8a2P25318 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.5□□□□□ -0.25
Col8a2P25318 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.5□□□□□ -0.25
Col8a2P25318 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col8a2P25318 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.5□□□□□ -0.25
Col8a2P25318 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.5□□□□□ -0.25
Col8a2P25318 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col8a2P25318 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col8a2P25318 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Gm15165-201ENSMUST00000118140 502 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Col8a2P25318 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Gm44357-201ENSMUST00000195897 142 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Gm19658-201ENSMUST00000196231 138 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Gm44367-201ENSMUST00000196836 138 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Gm44350-201ENSMUST00000197197 138 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Gm44390-201ENSMUST00000197533 144 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Gm44313-201ENSMUST00000198018 138 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Gm44486-201ENSMUST00000198508 138 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Gm44454-201ENSMUST00000198541 138 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Gm44314-201ENSMUST00000199263 138 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Gm44394-201ENSMUST00000199558 138 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Gm44484-201ENSMUST00000199873 138 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms