Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxd8P23463 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxd8P23463 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxd8P23463 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxd8P23463 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Hoxd8P23463 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxd8P23463 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.67■□□□□ 0.26
Hoxd8P23463 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxd8P23463 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxd8P23463 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxd8P23463 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.67■□□□□ 0.26
Hoxd8P23463 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxd8P23463 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.66■□□□□ 0.26
Hoxd8P23463 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hoxd8P23463 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.66■□□□□ 0.26
Hoxd8P23463 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.66■□□□□ 0.26
Hoxd8P23463 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Gm6257-201ENSMUST00000163864 910 ntBASIC16.66■□□□□ 0.26
Hoxd8P23463 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Gm2213-201ENSMUST00000197485 688 ntBASIC16.66■□□□□ 0.26
Hoxd8P23463 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.66■□□□□ 0.26
Hoxd8P23463 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.66■□□□□ 0.26
Hoxd8P23463 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.66■□□□□ 0.26
Hoxd8P23463 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hoxd8P23463 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.65■□□□□ 0.26
Hoxd8P23463 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Hoxd8P23463 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Gm37153-201ENSMUST00000193637 231 ntBASIC16.65■□□□□ 0.26
Hoxd8P23463 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hoxd8P23463 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hoxd8P23463 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxd8P23463 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Hoxd8P23463 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hoxd8P23463 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Hoxd8P23463 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxd8P23463 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxd8P23463 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hoxd8P23463 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxd8P23463 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxd8P23463 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxd8P23463 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.64■□□□□ 0.25
Hoxd8P23463 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hoxd8P23463 Gm2756-201ENSMUST00000195851 400 ntBASIC16.64■□□□□ 0.25
Hoxd8P23463 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.64■□□□□ 0.25
Hoxd8P23463 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxd8P23463 Gm10175-201ENSMUST00000086013 645 ntBASIC16.64■□□□□ 0.25
Hoxd8P23463 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxd8P23463 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Hoxd8P23463 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Hoxd8P23463 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxd8P23463 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxd8P23463 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxd8P23463 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxd8P23463 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxd8P23463 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxd8P23463 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxd8P23463 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxd8P23463 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxd8P23463 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Hoxd8P23463 Gm4995-201ENSMUST00000117247 432 ntBASIC16.63■□□□□ 0.25
Hoxd8P23463 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.63■□□□□ 0.25
Hoxd8P23463 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.63■□□□□ 0.25
Hoxd8P23463 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxd8P23463 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.63■□□□□ 0.25
Hoxd8P23463 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxd8P23463 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxd8P23463 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.63■□□□□ 0.25
Hoxd8P23463 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxd8P23463 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxd8P23463 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms