Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CfdP03953 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.58□□□□□ -0.24
CfdP03953 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.58□□□□□ -0.24
CfdP03953 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.58□□□□□ -0.24
CfdP03953 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.58□□□□□ -0.24
CfdP03953 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CfdP03953 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CfdP03953 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CfdP03953 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.58□□□□□ -0.24
CfdP03953 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CfdP03953 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CfdP03953 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CfdP03953 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CfdP03953 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CfdP03953 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CfdP03953 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CfdP03953 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
CfdP03953 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CfdP03953 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CfdP03953 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CfdP03953 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CfdP03953 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.57□□□□□ -0.24
CfdP03953 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CfdP03953 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CfdP03953 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.57□□□□□ -0.24
CfdP03953 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.57□□□□□ -0.24
CfdP03953 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CfdP03953 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CfdP03953 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CfdP03953 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.56□□□□□ -0.24
CfdP03953 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 BC037039-201ENSMUST00000192003 2205 ntBASIC13.56□□□□□ -0.24
CfdP03953 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CfdP03953 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CfdP03953 Actl10-202ENSMUST00000226583 1501 ntBASIC13.56□□□□□ -0.24
CfdP03953 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.56□□□□□ -0.24
CfdP03953 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CfdP03953 Gm43183-201ENSMUST00000200632 547 ntBASIC13.56□□□□□ -0.24
CfdP03953 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CfdP03953 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.56□□□□□ -0.24
CfdP03953 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CfdP03953 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CfdP03953 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.56□□□□□ -0.24
CfdP03953 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CfdP03953 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.56□□□□□ -0.24
CfdP03953 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CfdP03953 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CfdP03953 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.55□□□□□ -0.24
CfdP03953 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.55□□□□□ -0.24
CfdP03953 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CfdP03953 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.55□□□□□ -0.24
CfdP03953 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.55□□□□□ -0.24
CfdP03953 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.55□□□□□ -0.24
CfdP03953 Gm42569-201ENSMUST00000200539 472 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms