Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a1P02463 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a1P02463 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a1P02463 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a1P02463 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.81■□□□□ 0.76
Col4a1P02463 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.81■□□□□ 0.76
Col4a1P02463 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.81■□□□□ 0.76
Col4a1P02463 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.81■□□□□ 0.76
Col4a1P02463 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.81■□□□□ 0.76
Col4a1P02463 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.81■□□□□ 0.76
Col4a1P02463 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.81■□□□□ 0.76
Col4a1P02463 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.81■□□□□ 0.76
Col4a1P02463 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a1P02463 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Col4a1P02463 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.8■□□□□ 0.76
Col4a1P02463 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.8■□□□□ 0.76
Col4a1P02463 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a1P02463 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.8■□□□□ 0.76
Col4a1P02463 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a1P02463 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Col4a1P02463 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a1P02463 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.8■□□□□ 0.76
Col4a1P02463 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Col4a1P02463 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a1P02463 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a1P02463 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a1P02463 Gm8344-201ENSMUST00000119813 856 ntBASIC19.8■□□□□ 0.76
Col4a1P02463 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
Col4a1P02463 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a1P02463 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a1P02463 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a1P02463 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Col4a1P02463 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a1P02463 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Col4a1P02463 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a1P02463 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a1P02463 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a1P02463 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Col4a1P02463 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a1P02463 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a1P02463 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Col4a1P02463 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a1P02463 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a1P02463 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a1P02463 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a1P02463 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a1P02463 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Col4a1P02463 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Col4a1P02463 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Col4a1P02463 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a1P02463 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a1P02463 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a1P02463 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a1P02463 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a1P02463 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Col4a1P02463 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a1P02463 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a1P02463 Mir8117-201ENSMUST00000184773 107 ntBASIC19.78■□□□□ 0.76
Col4a1P02463 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.78■□□□□ 0.76
Col4a1P02463 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a1P02463 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a1P02463 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a1P02463 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a1P02463 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a1P02463 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Col4a1P02463 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Col4a1P02463 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a1P02463 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Col4a1P02463 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.78■□□□□ 0.76
Col4a1P02463 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a1P02463 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.78■□□□□ 0.76
Col4a1P02463 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a1P02463 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.77■□□□□ 0.76
Col4a1P02463 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a1P02463 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a1P02463 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a1P02463 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a1P02463 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Col4a1P02463 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a1P02463 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a1P02463 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.77■□□□□ 0.76
Col4a1P02463 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a1P02463 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
Col4a1P02463 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a1P02463 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
Col4a1P02463 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms