Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Gm13534-201ENSMUST00000121169 513 ntBASIC11.49□□□□□ -0.57
Hbb-b1P02088 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.49□□□□□ -0.57
Hbb-b1P02088 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-b1P02088 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Phf7-203ENSMUST00000226565 1971 ntBASIC11.48□□□□□ -0.57
Hbb-b1P02088 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC11.48□□□□□ -0.57
Hbb-b1P02088 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.48□□□□□ -0.57
Hbb-b1P02088 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Hbb-b1P02088 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.47□□□□□ -0.57
Hbb-b1P02088 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.47□□□□□ -0.57
Hbb-b1P02088 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.47□□□□□ -0.57
Hbb-b1P02088 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.47□□□□□ -0.57
Hbb-b1P02088 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Gm38285-201ENSMUST00000192928 922 ntBASIC11.47□□□□□ -0.57
Hbb-b1P02088 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Gm5812-201ENSMUST00000061073 957 ntBASIC11.47□□□□□ -0.57
Hbb-b1P02088 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hbb-b1P02088 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hbb-b1P02088 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hbb-b1P02088 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hbb-b1P02088 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hbb-b1P02088 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hbb-b1P02088 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hbb-b1P02088 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hbb-b1P02088 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hbb-b1P02088 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hbb-b1P02088 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hbb-b1P02088 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hbb-b1P02088 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms