Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Setdb1O88974 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.74■□□□□ 0.75
Setdb1O88974 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Setdb1O88974 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Setdb1O88974 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Setdb1O88974 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Setdb1O88974 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Setdb1O88974 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Setdb1O88974 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.73■□□□□ 0.75
Setdb1O88974 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Setdb1O88974 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.73■□□□□ 0.75
Setdb1O88974 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.73■□□□□ 0.75
Setdb1O88974 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.73■□□□□ 0.75
Setdb1O88974 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Setdb1O88974 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Setdb1O88974 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Setdb1O88974 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.73■□□□□ 0.75
Setdb1O88974 Gm7506-201ENSMUST00000207758 815 ntBASIC19.73■□□□□ 0.75
Setdb1O88974 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Setdb1O88974 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Setdb1O88974 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Setdb1O88974 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Setdb1O88974 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Setdb1O88974 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Setdb1O88974 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Setdb1O88974 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Setdb1O88974 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Setdb1O88974 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.72■□□□□ 0.75
Setdb1O88974 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Setdb1O88974 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Setdb1O88974 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.72■□□□□ 0.75
Setdb1O88974 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Setdb1O88974 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.72■□□□□ 0.75
Setdb1O88974 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Setdb1O88974 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Setdb1O88974 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.71■□□□□ 0.75
Setdb1O88974 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Setdb1O88974 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Setdb1O88974 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.71■□□□□ 0.75
Setdb1O88974 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.71■□□□□ 0.75
Setdb1O88974 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Setdb1O88974 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Setdb1O88974 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Setdb1O88974 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.7■□□□□ 0.74
Setdb1O88974 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Setdb1O88974 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Setdb1O88974 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Setdb1O88974 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Setdb1O88974 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Setdb1O88974 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Setdb1O88974 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Setdb1O88974 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Setdb1O88974 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Setdb1O88974 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Setdb1O88974 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Setdb1O88974 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Setdb1O88974 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.7■□□□□ 0.74
Setdb1O88974 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Setdb1O88974 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Setdb1O88974 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Setdb1O88974 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Setdb1O88974 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Setdb1O88974 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Setdb1O88974 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Setdb1O88974 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Setdb1O88974 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Setdb1O88974 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Setdb1O88974 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Setdb1O88974 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Setdb1O88974 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Setdb1O88974 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Setdb1O88974 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.68■□□□□ 0.74
Setdb1O88974 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.68■□□□□ 0.74
Setdb1O88974 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.68■□□□□ 0.74
Setdb1O88974 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.68■□□□□ 0.74
Setdb1O88974 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms