Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Dnmt3bO88509 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.65■□□□□ 0.1
Dnmt3bO88509 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Gm16061-201ENSMUST00000122167 857 ntBASIC15.65■□□□□ 0.1
Dnmt3bO88509 Gm27704-201ENSMUST00000185094 107 ntBASIC15.65■□□□□ 0.1
Dnmt3bO88509 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.65■□□□□ 0.1
Dnmt3bO88509 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Dnmt3bO88509 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.64■□□□□ 0.09
Dnmt3bO88509 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Gm17971-201ENSMUST00000190239 806 ntBASIC15.64■□□□□ 0.09
Dnmt3bO88509 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Dnmt3bO88509 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Gm13474-201ENSMUST00000122466 815 ntBASIC15.63■□□□□ 0.09
Dnmt3bO88509 Gm24841-201ENSMUST00000158676 357 ntBASIC15.63■□□□□ 0.09
Dnmt3bO88509 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Gm27389-201ENSMUST00000183622 195 ntBASIC15.63■□□□□ 0.09
Dnmt3bO88509 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.63■□□□□ 0.09
Dnmt3bO88509 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.63■□□□□ 0.09
Dnmt3bO88509 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Dnmt3bO88509 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.62■□□□□ 0.09
Dnmt3bO88509 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Dnmt3bO88509 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Dnmt3bO88509 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Dnmt3bO88509 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Dnmt3bO88509 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Dnmt3bO88509 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Dnmt3bO88509 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms