Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Rpl35aO55142 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rpl35aO55142 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Rpl35aO55142 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rpl35aO55142 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rpl35aO55142 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.08□□□□□ -0.48
Rpl35aO55142 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rpl35aO55142 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Rpl35aO55142 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpl35aO55142 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Rpl35aO55142 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rpl35aO55142 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rpl35aO55142 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl35aO55142 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rpl35aO55142 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl35aO55142 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl35aO55142 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl35aO55142 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rpl35aO55142 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl35aO55142 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.06□□□□□ -0.48
Rpl35aO55142 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl35aO55142 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rpl35aO55142 Gm27742-201ENSMUST00000184667 60 ntBASIC12.06□□□□□ -0.48
Rpl35aO55142 Gm17807-201ENSMUST00000186869 298 ntBASIC12.06□□□□□ -0.48
Rpl35aO55142 Ank2-226ENSMUST00000189368 339 ntBASIC12.06□□□□□ -0.48
Rpl35aO55142 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.06□□□□□ -0.48
Rpl35aO55142 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rpl35aO55142 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl35aO55142 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl35aO55142 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.06□□□□□ -0.48
Rpl35aO55142 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rpl35aO55142 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl35aO55142 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rpl35aO55142 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl35aO55142 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl35aO55142 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl35aO55142 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.06□□□□□ -0.48
Rpl35aO55142 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl35aO55142 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rpl35aO55142 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rpl35aO55142 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Rpl35aO55142 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rpl35aO55142 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.05□□□□□ -0.48
Rpl35aO55142 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.05□□□□□ -0.48
Rpl35aO55142 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rpl35aO55142 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms