Protein–RNA interactions for Protein: O55106

Strn, Striatin, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrnO55106 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.8■□□□□ 0.44
StrnO55106 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
StrnO55106 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
StrnO55106 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.8■□□□□ 0.44
StrnO55106 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
StrnO55106 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.8■□□□□ 0.44
StrnO55106 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
StrnO55106 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.8■□□□□ 0.44
StrnO55106 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.8■□□□□ 0.44
StrnO55106 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.8■□□□□ 0.44
StrnO55106 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
StrnO55106 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.8■□□□□ 0.44
StrnO55106 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
StrnO55106 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
StrnO55106 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
StrnO55106 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
StrnO55106 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
StrnO55106 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
StrnO55106 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.79■□□□□ 0.44
StrnO55106 Gm13036-201ENSMUST00000117799 748 ntBASIC17.79■□□□□ 0.44
StrnO55106 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.79■□□□□ 0.44
StrnO55106 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
StrnO55106 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.79■□□□□ 0.44
StrnO55106 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
StrnO55106 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
StrnO55106 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
StrnO55106 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
StrnO55106 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
StrnO55106 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
StrnO55106 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
StrnO55106 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
StrnO55106 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.79■□□□□ 0.44
StrnO55106 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
StrnO55106 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.78■□□□□ 0.44
StrnO55106 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.78■□□□□ 0.44
StrnO55106 Gm7222-201ENSMUST00000117512 906 ntBASIC17.78■□□□□ 0.44
StrnO55106 Gm14140-201ENSMUST00000119999 995 ntBASIC17.78■□□□□ 0.44
StrnO55106 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.78■□□□□ 0.44
StrnO55106 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
StrnO55106 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Gm2756-201ENSMUST00000195851 400 ntBASIC17.78■□□□□ 0.44
StrnO55106 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
StrnO55106 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
StrnO55106 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
StrnO55106 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.77■□□□□ 0.44
StrnO55106 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
StrnO55106 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
StrnO55106 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
StrnO55106 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
StrnO55106 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
StrnO55106 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
StrnO55106 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
StrnO55106 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
StrnO55106 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
StrnO55106 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.77■□□□□ 0.44
StrnO55106 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
StrnO55106 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
StrnO55106 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
StrnO55106 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
StrnO55106 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
StrnO55106 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
StrnO55106 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
StrnO55106 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
StrnO55106 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
StrnO55106 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
StrnO55106 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
StrnO55106 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
StrnO55106 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
StrnO55106 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
StrnO55106 Gm12260-201ENSMUST00000122447 411 ntBASIC17.76■□□□□ 0.43
StrnO55106 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms