Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pde6dO55057 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.84□□□□□ -0.35
Pde6dO55057 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.84□□□□□ -0.35
Pde6dO55057 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Pde6dO55057 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pde6dO55057 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Pde6dO55057 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Pde6dO55057 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.84□□□□□ -0.35
Pde6dO55057 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6dO55057 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Pde6dO55057 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pde6dO55057 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6dO55057 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6dO55057 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.83□□□□□ -0.36
Pde6dO55057 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6dO55057 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6dO55057 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.83□□□□□ -0.36
Pde6dO55057 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6dO55057 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.83□□□□□ -0.36
Pde6dO55057 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.83□□□□□ -0.36
Pde6dO55057 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Pde6dO55057 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.83□□□□□ -0.36
Pde6dO55057 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6dO55057 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6dO55057 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6dO55057 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pde6dO55057 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6dO55057 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6dO55057 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6dO55057 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pde6dO55057 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.82□□□□□ -0.36
Pde6dO55057 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pde6dO55057 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pde6dO55057 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.82□□□□□ -0.36
Pde6dO55057 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.82□□□□□ -0.36
Pde6dO55057 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.82□□□□□ -0.36
Pde6dO55057 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pde6dO55057 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Pde6dO55057 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.82□□□□□ -0.36
Pde6dO55057 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6dO55057 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pde6dO55057 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Gm7291-201ENSMUST00000199147 382 ntBASIC12.81□□□□□ -0.36
Pde6dO55057 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.81□□□□□ -0.36
Pde6dO55057 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Pde6dO55057 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6dO55057 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms