Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm11877-201ENSMUST00000118921 852 ntBASIC14.32□□□□□ -0.12
Dkk1O54908 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.32□□□□□ -0.12
Dkk1O54908 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Dkk1O54908 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.32□□□□□ -0.12
Dkk1O54908 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Dkk1O54908 Gm18382-201ENSMUST00000194394 582 ntBASIC14.32□□□□□ -0.12
Dkk1O54908 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.32□□□□□ -0.12
Dkk1O54908 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.32□□□□□ -0.12
Dkk1O54908 Gm45453-201ENSMUST00000211758 853 ntBASIC14.32□□□□□ -0.12
Dkk1O54908 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Dkk1O54908 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Dkk1O54908 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Dkk1O54908 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.32□□□□□ -0.12
Dkk1O54908 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Dkk1O54908 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dkk1O54908 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Dkk1O54908 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Dkk1O54908 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Gm13216-201ENSMUST00000117145 591 ntBASIC14.31□□□□□ -0.12
Dkk1O54908 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Gm22119-201ENSMUST00000175594 99 ntBASIC14.31□□□□□ -0.12
Dkk1O54908 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Gm37631-201ENSMUST00000192275 364 ntBASIC14.31□□□□□ -0.12
Dkk1O54908 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.31□□□□□ -0.12
Dkk1O54908 Gm43787-201ENSMUST00000197792 1037 ntBASIC14.31□□□□□ -0.12
Dkk1O54908 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Dkk1O54908 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Dkk1O54908 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Dkk1O54908 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.31□□□□□ -0.12
Dkk1O54908 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dkk1O54908 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.3□□□□□ -0.12
Dkk1O54908 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Dkk1O54908 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.3□□□□□ -0.12
Dkk1O54908 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC14.3□□□□□ -0.12
Dkk1O54908 Gm6659-201ENSMUST00000174752 547 ntBASIC14.3□□□□□ -0.12
Dkk1O54908 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.3□□□□□ -0.12
Dkk1O54908 Gm27039-201ENSMUST00000182438 962 ntBASIC14.3□□□□□ -0.12
Dkk1O54908 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC14.3□□□□□ -0.12
Dkk1O54908 AC116724.1-201ENSMUST00000227900 972 ntBASIC14.3□□□□□ -0.12
Dkk1O54908 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.3□□□□□ -0.12
Dkk1O54908 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC14.3□□□□□ -0.12
Dkk1O54908 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Aebp2-205ENSMUST00000160836 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.3□□□□□ -0.12
Dkk1O54908 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.3□□□□□ -0.12
Dkk1O54908 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dkk1O54908 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dkk1O54908 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Dkk1O54908 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Dkk1O54908 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dkk1O54908 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dkk1O54908 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dkk1O54908 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dkk1O54908 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dkk1O54908 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Dkk1O54908 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Dkk1O54908 Gm11336-201ENSMUST00000118168 334 ntBASIC14.29□□□□□ -0.12
Dkk1O54908 Gm15529-201ENSMUST00000121833 994 ntBASIC14.29□□□□□ -0.12
Dkk1O54908 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Dkk1O54908 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms