Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ChkaO54804 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ChkaO54804 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ChkaO54804 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.4■□□□□ 0.22
ChkaO54804 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ChkaO54804 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ChkaO54804 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ChkaO54804 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ChkaO54804 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ChkaO54804 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ChkaO54804 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ChkaO54804 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ChkaO54804 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ChkaO54804 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ChkaO54804 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ChkaO54804 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ChkaO54804 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ChkaO54804 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ChkaO54804 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ChkaO54804 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ChkaO54804 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.39■□□□□ 0.21
ChkaO54804 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ChkaO54804 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.39■□□□□ 0.21
ChkaO54804 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.39■□□□□ 0.21
ChkaO54804 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ChkaO54804 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.39■□□□□ 0.21
ChkaO54804 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ChkaO54804 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ChkaO54804 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ChkaO54804 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ChkaO54804 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ChkaO54804 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ChkaO54804 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ChkaO54804 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ChkaO54804 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ChkaO54804 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ChkaO54804 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ChkaO54804 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ChkaO54804 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ChkaO54804 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.38■□□□□ 0.21
ChkaO54804 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ChkaO54804 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.38■□□□□ 0.21
ChkaO54804 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ChkaO54804 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.38■□□□□ 0.21
ChkaO54804 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.38■□□□□ 0.21
ChkaO54804 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ChkaO54804 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ChkaO54804 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ChkaO54804 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ChkaO54804 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.37■□□□□ 0.21
ChkaO54804 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ChkaO54804 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Prob1-201ENSMUST00000097619 3021 ntBASIC16.37■□□□□ 0.21
ChkaO54804 Gm45058-201ENSMUST00000205810 766 ntBASIC16.37■□□□□ 0.21
ChkaO54804 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.37■□□□□ 0.21
ChkaO54804 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.37■□□□□ 0.21
ChkaO54804 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
ChkaO54804 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ChkaO54804 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.37■□□□□ 0.21
ChkaO54804 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ChkaO54804 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ChkaO54804 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.37■□□□□ 0.21
ChkaO54804 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ChkaO54804 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.36■□□□□ 0.21
ChkaO54804 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.36■□□□□ 0.21
ChkaO54804 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
ChkaO54804 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Gm18959-201ENSMUST00000208954 655 ntBASIC16.36■□□□□ 0.21
ChkaO54804 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ChkaO54804 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ChkaO54804 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ChkaO54804 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ChkaO54804 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms