Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Ccr6O54689 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.66□□□□□ -0.22
Ccr6O54689 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccr6O54689 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccr6O54689 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccr6O54689 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccr6O54689 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccr6O54689 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccr6O54689 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.65□□□□□ -0.22
Ccr6O54689 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.65□□□□□ -0.22
Ccr6O54689 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccr6O54689 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccr6O54689 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccr6O54689 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccr6O54689 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ccr6O54689 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccr6O54689 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.64□□□□□ -0.23
Ccr6O54689 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ccr6O54689 AV356131-201ENSMUST00000206201 750 ntBASIC13.64□□□□□ -0.23
Ccr6O54689 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.64□□□□□ -0.23
Ccr6O54689 Gm4968-201ENSMUST00000071458 858 ntBASIC13.64□□□□□ -0.23
Ccr6O54689 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccr6O54689 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Ccr6O54689 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccr6O54689 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccr6O54689 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccr6O54689 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccr6O54689 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ccr6O54689 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.63□□□□□ -0.23
Ccr6O54689 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Ccr6O54689 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ccr6O54689 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ccr6O54689 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccr6O54689 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccr6O54689 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccr6O54689 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccr6O54689 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccr6O54689 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.63□□□□□ -0.23
Ccr6O54689 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccr6O54689 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccr6O54689 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccr6O54689 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Ccr6O54689 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ccr6O54689 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccr6O54689 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccr6O54689 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Ccr6O54689 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccr6O54689 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccr6O54689 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Phf7-203ENSMUST00000226565 1971 ntBASIC13.62□□□□□ -0.23
Ccr6O54689 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms