Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.25■□□□□ 0.19
Phox2bO35690 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.25■□□□□ 0.19
Phox2bO35690 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.25■□□□□ 0.19
Phox2bO35690 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.25■□□□□ 0.19
Phox2bO35690 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Phox2bO35690 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Phox2bO35690 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 Phf7-203ENSMUST00000226565 1971 ntBASIC16.24■□□□□ 0.19
Phox2bO35690 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Phox2bO35690 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.24■□□□□ 0.19
Phox2bO35690 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Phox2bO35690 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Phox2bO35690 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Phox2bO35690 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Phox2bO35690 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.23■□□□□ 0.19
Phox2bO35690 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.23■□□□□ 0.19
Phox2bO35690 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.23■□□□□ 0.19
Phox2bO35690 Gm7506-201ENSMUST00000207758 815 ntBASIC16.23■□□□□ 0.19
Phox2bO35690 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.23■□□□□ 0.19
Phox2bO35690 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.23■□□□□ 0.19
Phox2bO35690 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Phox2bO35690 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Phox2bO35690 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.22■□□□□ 0.19
Phox2bO35690 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.22■□□□□ 0.19
Phox2bO35690 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Phox2bO35690 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.22■□□□□ 0.19
Phox2bO35690 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Phox2bO35690 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.22■□□□□ 0.19
Phox2bO35690 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.22■□□□□ 0.19
Phox2bO35690 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.22■□□□□ 0.19
Phox2bO35690 Gm25745-201ENSMUST00000174945 133 ntBASIC16.22■□□□□ 0.19
Phox2bO35690 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.22■□□□□ 0.19
Phox2bO35690 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Phox2bO35690 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Phox2bO35690 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Phox2bO35690 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Phox2bO35690 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Phox2bO35690 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Phox2bO35690 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Phox2bO35690 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms