Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
Shisa8J3QNX5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Shisa8J3QNX5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shisa8J3QNX5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Shisa8J3QNX5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shisa8J3QNX5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Shisa8J3QNX5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Shisa8J3QNX5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shisa8J3QNX5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shisa8J3QNX5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.82□□□□□ -0.04
Shisa8J3QNX5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms