Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 AA414768-201ENSMUST00000121924 1257 ntBASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Gm25016-201ENSMUST00000158399 131 ntBASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Gm44430-201ENSMUST00000203376 995 ntBASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-3J3QMG8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Gm11950-201ENSMUST00000121615 838 ntBASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Gm29518-201ENSMUST00000190858 372 ntBASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Gm17808-201ENSMUST00000200859 894 ntBASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.25□□□□□ -0.13
Trav13d-3J3QMG8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-3J3QMG8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms