Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ScaperF8VQ70 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ScaperF8VQ70 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ScaperF8VQ70 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.53■□□□□ 0.88
ScaperF8VQ70 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Auts2-212ENSMUST00000178555 309 ntBASIC20.53■□□□□ 0.88
ScaperF8VQ70 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ScaperF8VQ70 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.52■□□□□ 0.88
ScaperF8VQ70 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ScaperF8VQ70 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
ScaperF8VQ70 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.52■□□□□ 0.88
ScaperF8VQ70 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ScaperF8VQ70 Gm15590-201ENSMUST00000078419 552 ntBASIC20.52■□□□□ 0.88
ScaperF8VQ70 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ScaperF8VQ70 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.52■□□□□ 0.88
ScaperF8VQ70 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ScaperF8VQ70 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ScaperF8VQ70 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ScaperF8VQ70 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ScaperF8VQ70 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ScaperF8VQ70 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ScaperF8VQ70 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ScaperF8VQ70 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ScaperF8VQ70 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ScaperF8VQ70 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ScaperF8VQ70 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
ScaperF8VQ70 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ScaperF8VQ70 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
ScaperF8VQ70 Gm9727-201ENSMUST00000161387 555 ntBASIC20.5■□□□□ 0.87
ScaperF8VQ70 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.5■□□□□ 0.87
ScaperF8VQ70 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ScaperF8VQ70 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.5■□□□□ 0.87
ScaperF8VQ70 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.5■□□□□ 0.87
ScaperF8VQ70 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ScaperF8VQ70 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.5■□□□□ 0.87
ScaperF8VQ70 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.5■□□□□ 0.87
ScaperF8VQ70 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ScaperF8VQ70 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ScaperF8VQ70 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ScaperF8VQ70 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ScaperF8VQ70 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ScaperF8VQ70 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
ScaperF8VQ70 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ScaperF8VQ70 AV026068-213ENSMUST00000223675 1171 ntBASIC20.49■□□□□ 0.87
ScaperF8VQ70 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ScaperF8VQ70 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ScaperF8VQ70 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ScaperF8VQ70 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ScaperF8VQ70 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ScaperF8VQ70 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ScaperF8VQ70 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ScaperF8VQ70 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ScaperF8VQ70 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ScaperF8VQ70 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ScaperF8VQ70 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ScaperF8VQ70 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ScaperF8VQ70 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ScaperF8VQ70 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
ScaperF8VQ70 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.48■□□□□ 0.87
ScaperF8VQ70 Gm25745-201ENSMUST00000174945 133 ntBASIC20.48■□□□□ 0.87
ScaperF8VQ70 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.48■□□□□ 0.87
ScaperF8VQ70 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ScaperF8VQ70 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.48■□□□□ 0.87
ScaperF8VQ70 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.48■□□□□ 0.87
ScaperF8VQ70 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ScaperF8VQ70 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ScaperF8VQ70 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ScaperF8VQ70 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ScaperF8VQ70 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ScaperF8VQ70 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ScaperF8VQ70 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ScaperF8VQ70 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms