Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.73□□□□□ -0.21
Cpsf4lE9Q2N0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpsf4lE9Q2N0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpsf4lE9Q2N0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4lE9Q2N0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4lE9Q2N0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4lE9Q2N0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Cpsf4lE9Q2N0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4lE9Q2N0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4lE9Q2N0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Cpsf4lE9Q2N0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4lE9Q2N0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4lE9Q2N0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4lE9Q2N0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cpsf4lE9Q2N0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms