Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Gm12085-201ENSMUST00000119263 940 ntBASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11127A7VMS2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Gm20760-201ENSMUST00000179197 648 ntBASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm11127A7VMS2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Gm13168-201ENSMUST00000121771 632 ntBASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm11127A7VMS2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11127A7VMS2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Gm11127A7VMS2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Gm11127A7VMS2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11127A7VMS2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11127A7VMS2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11127A7VMS2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11127A7VMS2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11127A7VMS2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11127A7VMS2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms