Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Shroom2A2ALU4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Shroom2A2ALU4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Shroom2A2ALU4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Shroom2A2ALU4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Shroom2A2ALU4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
Shroom2A2ALU4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Shroom2A2ALU4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC25.45■■□□□ 1.67
Shroom2A2ALU4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom2A2ALU4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom2A2ALU4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC25.45■■□□□ 1.66
Shroom2A2ALU4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom2A2ALU4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom2A2ALU4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom2A2ALU4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom2A2ALU4 Gm15487-201ENSMUST00000122373 465 ntBASIC25.45■■□□□ 1.66
Shroom2A2ALU4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom2A2ALU4 Gm17837-201ENSMUST00000186435 985 ntBASIC25.45■■□□□ 1.66
Shroom2A2ALU4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Shroom2A2ALU4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom2A2ALU4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Shroom2A2ALU4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Shroom2A2ALU4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Shroom2A2ALU4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC25.44■■□□□ 1.66
Shroom2A2ALU4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Shroom2A2ALU4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Shroom2A2ALU4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
Shroom2A2ALU4 Gm13829-201ENSMUST00000119600 138 ntBASIC25.44■■□□□ 1.66
Shroom2A2ALU4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Shroom2A2ALU4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Shroom2A2ALU4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Shroom2A2ALU4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom2A2ALU4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom2A2ALU4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom2A2ALU4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom2A2ALU4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC25.43■■□□□ 1.66
Shroom2A2ALU4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom2A2ALU4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom2A2ALU4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom2A2ALU4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom2A2ALU4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom2A2ALU4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom2A2ALU4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Shroom2A2ALU4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Shroom2A2ALU4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Shroom2A2ALU4 Gm6415-201ENSMUST00000118488 348 ntBASIC25.42■■□□□ 1.66
Shroom2A2ALU4 Gm15358-201ENSMUST00000119249 520 ntBASIC25.42■■□□□ 1.66
Shroom2A2ALU4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Shroom2A2ALU4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Shroom2A2ALU4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Shroom2A2ALU4 Syt7-204ENSMUST00000223586 1344 ntBASIC25.42■■□□□ 1.66
Shroom2A2ALU4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Shroom2A2ALU4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Shroom2A2ALU4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC25.41■■□□□ 1.66
Shroom2A2ALU4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Shroom2A2ALU4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC25.41■■□□□ 1.66
Shroom2A2ALU4 AC124732.1-201ENSMUST00000221551 910 ntBASIC25.41■■□□□ 1.66
Shroom2A2ALU4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Shroom2A2ALU4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Shroom2A2ALU4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
Shroom2A2ALU4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Shroom2A2ALU4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Shroom2A2ALU4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC25.41■■□□□ 1.66
Shroom2A2ALU4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Shroom2A2ALU4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Shroom2A2ALU4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Shroom2A2ALU4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Shroom2A2ALU4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
Shroom2A2ALU4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Shroom2A2ALU4 Gm45384-201ENSMUST00000210451 277 ntBASIC25.39■■□□□ 1.65
Shroom2A2ALU4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC25.39■■□□□ 1.65
Shroom2A2ALU4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
Shroom2A2ALU4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Shroom2A2ALU4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
Shroom2A2ALU4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Shroom2A2ALU4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Shroom2A2ALU4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Shroom2A2ALU4 Gm11478-201ENSMUST00000117851 599 ntBASIC25.38■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms