Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc112A0AUP1 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc112A0AUP1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Gm13436-201ENSMUST00000120418 567 ntBASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc112A0AUP1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc112A0AUP1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc112A0AUP1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc112A0AUP1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc112A0AUP1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc112A0AUP1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc112A0AUP1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Prob1-201ENSMUST00000097619 3021 ntBASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc112A0AUP1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms