Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.58■□□□□ 0.25
Rpl9-ps6A0A140T8T4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.58■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm25406-201ENSMUST00000157599 105 ntBASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm9172-201ENSMUST00000212092 954 ntBASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gm28659-201ENSMUST00000188013 759 ntBASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpl9-ps6A0A140T8T4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms