Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgb8A0A140LI48 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgb8A0A140LI48 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhgb8A0A140LI48 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhgb8A0A140LI48 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhgb8A0A140LI48 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Gm7638-201ENSMUST00000121348 967 ntBASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Gm16061-201ENSMUST00000122167 857 ntBASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Gm13474-201ENSMUST00000122466 815 ntBASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhgb8A0A140LI48 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhgb8A0A140LI48 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms