Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Mir1668-201ENSMUST00000184114 107 ntBASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13559-201ENSMUST00000120476 863 ntBASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Prob1-201ENSMUST00000097619 3021 ntBASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26039-201ENSMUST00000158152 144 ntBASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms