Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm38027-201ENSMUST00000192315 235 ntBASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms