Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm18101-201ENSMUST00000215769 548 ntBASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm9987-201ENSMUST00000069768 567 ntBASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-2A0A0G2JDP3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms