Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Gm38027-201ENSMUST00000192315 235 ntBASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Prob1-201ENSMUST00000097619 3021 ntBASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav19A0A0B4J1K4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav19A0A0B4J1K4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav19A0A0B4J1K4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Trav19A0A0B4J1K4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Trav19A0A0B4J1K4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Trmt13-210ENSMUST00000198454 880 ntBASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav19A0A0B4J1K4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav19A0A0B4J1K4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Actl10-202ENSMUST00000226583 1501 ntBASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav19A0A0B4J1K4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms