Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav4-3A0A0B4J1K1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav4-3A0A0B4J1K1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm4974-201ENSMUST00000209974 875 ntBASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trav4-3A0A0B4J1K1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm15375-201ENSMUST00000119510 849 ntBASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav4-3A0A0B4J1K1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms