Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv3A0A0A6YYE2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm42642-201ENSMUST00000200683 355 ntBASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Gm2559-201ENSMUST00000201323 363 ntBASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv3A0A0A6YYE2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv3A0A0A6YYE2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv3A0A0A6YYE2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv3A0A0A6YYE2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trbv3A0A0A6YYE2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv3A0A0A6YYE2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv3A0A0A6YYE2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv3A0A0A6YYE2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv3A0A0A6YYE2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.52□□□□□ -0.4
Trbv3A0A0A6YYE2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Dio3-201ENSMUST00000097228 1449 ntBASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.52□□□□□ -0.41
Trbv3A0A0A6YYE2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms