Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ighv1-47A0A0A6YY41 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm7889-201ENSMUST00000185591 958 ntBASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm45058-201ENSMUST00000205810 766 ntBASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm7213-201ENSMUST00000215977 950 ntBASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ighv1-47A0A0A6YY41 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ighv1-47A0A0A6YY41 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ighv1-47A0A0A6YY41 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Actl10-202ENSMUST00000226583 1501 ntBASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Gm18115-201ENSMUST00000221209 621 ntBASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ighv1-47A0A0A6YY41 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.38□□□□□ -0.27
Ighv1-47A0A0A6YY41 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv1-47A0A0A6YY41 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ighv1-47A0A0A6YY41 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms