Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm7213-201ENSMUST00000215977 950 ntBASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav21-dv12A0A075B6C4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm18115-201ENSMUST00000221209 621 ntBASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav21-dv12A0A075B6C4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms