Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-3A0A075B6A4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.47
Trav12d-3A0A075B6A4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.15□□□□□ -0.47
Trav12d-3A0A075B6A4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm14117-201ENSMUST00000122417 843 ntBASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav12d-3A0A075B6A4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm13234-201ENSMUST00000120010 747 ntBASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm6576-201ENSMUST00000169678 883 ntBASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav12d-3A0A075B6A4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms