Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Gm7370-201ENSMUST00000219471 767 ntBASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Phf7-203ENSMUST00000226565 1971 ntBASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5-4A0A075B652 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Gm11539-201ENSMUST00000119837 557 ntBASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-4A0A075B652 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Actl10-202ENSMUST00000226583 1501 ntBASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav5-4A0A075B652 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms