Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Odf3b-204ENSMUST00000227834 930 ntBASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav4-4-dv10A0A075B651 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav4-4-dv10A0A075B651 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Phf7-203ENSMUST00000226565 1971 ntBASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-4-dv10A0A075B651 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Mir1199-201ENSMUST00000117015 119 ntBASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-4-dv10A0A075B651 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gm44450-201ENSMUST00000199528 114 ntBASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms