Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-7-dv9A0A075B639 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Trav6-7-dv9A0A075B639 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-7-dv9A0A075B639 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-7-dv9A0A075B639 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-7-dv9A0A075B639 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-7-dv9A0A075B639 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-7-dv9A0A075B639 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Gm37722-201ENSMUST00000193757 208 ntBASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-7-dv9A0A075B639 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-7-dv9A0A075B639 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms