Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Mir5122-201ENSMUST00000175004 89 ntBASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Gm22240-201ENSMUST00000175225 82 ntBASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Actl10-202ENSMUST00000226583 1501 ntBASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-4A0A075B631 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav9n-4A0A075B631 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms