Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gm10698-201ENSMUST00000182663 604 ntBASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gm7791-201ENSMUST00000219066 539 ntBASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Timm23-208ENSMUST00000226683 750 ntBASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gm12527-201ENSMUST00000117967 564 ntBASIC13.79□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.79□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms