Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16d-dv11A0A075B617 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm6211-202ENSMUST00000167849 925 ntBASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm10493-201ENSMUST00000097270 612 ntBASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16d-dv11A0A075B617 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16d-dv11A0A075B617 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16d-dv11A0A075B617 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16d-dv11A0A075B617 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16d-dv11A0A075B617 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16d-dv11A0A075B617 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16d-dv11A0A075B617 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trav16d-dv11A0A075B617 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16d-dv11A0A075B617 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm7290-201ENSMUST00000104990 617 ntBASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm15375-201ENSMUST00000119510 849 ntBASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm12918-201ENSMUST00000120234 636 ntBASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm15710-201ENSMUST00000121821 636 ntBASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm5075-201ENSMUST00000196916 622 ntBASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav16d-dv11A0A075B617 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm18671-201ENSMUST00000214826 683 ntBASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms