Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN16Q9Y5I7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN16Q9Y5I7 AL021368.2-201ENST00000606125 5352 ntBASIC3.19□□□□□ -1.9
CLDN16Q9Y5I7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN16Q9Y5I7 MTCO1P12-201ENST00000414273 1543 ntBASIC3.19□□□□□ -1.9
CLDN16Q9Y5I7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN16Q9Y5I7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC058791.1-201ENST00000608412 3198 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 SNORA63.1-201ENST00000362493 131 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 Y_RNA.373-201ENST00000365600 103 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 RNU6-395P-201ENST00000365662 106 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 RNU6-434P-201ENST00000384376 107 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 RNU6-1035P-201ENST00000384477 107 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 RNU6-1127P-201ENST00000384580 107 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 RNU6-1179P-201ENST00000384667 107 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 RNA5SP252-201ENST00000391131 119 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AL592114.1-201ENST00000403842 483 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 RPS4XP7-201ENST00000406274 780 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 RNU4-26P-201ENST00000410270 107 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 EEF1A1P40-201ENST00000412883 573 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 RPL30P16-201ENST00000419341 429 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 ERLEC1P1-201ENST00000433806 578 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 MTND4P18-201ENST00000447010 465 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC008264.1-201ENST00000447612 367 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC091153.1-201ENST00000466297 402 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC021205.2-201ENST00000480069 347 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 RPS29P25-201ENST00000481709 171 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 MTCYBP18-201ENST00000501056 747 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 MTCO3P9-201ENST00000506989 781 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC104136.1-201ENST00000512969 394 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 MIR2276-201ENST00000516886 89 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 PSMA2P1-201ENST00000526365 646 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC011602.1-201ENST00000546484 331 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 MIR548S-201ENST00000581352 82 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 NUTF2P8-201ENST00000604593 363 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 BNIP3P10-201ENST00000605360 577 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC019176.2-201ENST00000611579 315 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 U6.42-201ENST00000618440 107 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AC099654.14-201ENST00000638599 341 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AL513302.2-201ENST00000562313 1842 ntBASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN16Q9Y5I7 AP003122.5-201ENST00000527668 3766 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 Y_RNA.86-201ENST00000363020 111 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 Y_RNA.160-201ENST00000363677 92 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 RNA5SP50-201ENST00000363731 107 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 RNU6-217P-201ENST00000384164 104 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 RNU6-45P-201ENST00000384471 107 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 RNA5SP44-201ENST00000410446 133 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 ARL5AP1-201ENST00000418991 388 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC005300.1-201ENST00000428401 373 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 RPS15AP27-201ENST00000449183 343 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC034236.1-201ENST00000469891 373 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 RPS26P21-201ENST00000475397 348 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC098799.2-201ENST00000509466 868 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC074344.1-201ENST00000512823 224 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 SNORA70.19-201ENST00000516717 90 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AP003122.3-201ENST00000526316 255 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC084851.1-201ENST00000529105 249 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AP000867.2-201ENST00000532468 320 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms