Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC011233.1-201ENST00000422812 283 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 RPS3AP44-201ENST00000425466 790 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 RPS29P26-201ENST00000477483 171 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AC018437.1-201ENST00000492214 406 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AC090255.1-201ENST00000495779 349 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AC116655.1-201ENST00000508324 901 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AC074250.1-201ENST00000511117 192 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 HSPA8P4-201ENST00000511877 1920 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AF131216.2-201ENST00000512316 564 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 MIR892C-201ENST00000516410 77 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 ACA59.2-201ENST00000517061 156 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AP003467.2-201ENST00000520175 319 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AP005902.1-201ENST00000521358 186 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 EEF1A1P37-201ENST00000522748 715 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AC243972.3-201ENST00000539655 198 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 MIR1273C-201ENST00000578669 77 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AL020997.2-201ENST00000602607 184 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AP002360.4-201ENST00000606980 481 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 MIR15A-201ENST00000607334 83 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 RNU6-87P-201ENST00000607561 108 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AL355816.2-201ENST00000610049 647 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AL031601.2-202ENST00000622650 282 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 AC138627.2-201ENST00000624202 601 ntBASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
KCNIP3Q9Y2W7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 OR5J1P-201ENST00000313544 939 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 Y_RNA.33-201ENST00000362591 102 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 RNU6-1280P-201ENST00000365211 107 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 RNVU1-14-201ENST00000384770 164 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 AL355497.1-201ENST00000406262 551 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 RNU6-1025P-201ENST00000410629 104 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 Y_RNA.625-201ENST00000411256 107 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 HMGN2P38-201ENST00000423806 265 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 AC010099.3-201ENST00000423896 409 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 AC007560.1-201ENST00000426912 237 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 AL591719.1-201ENST00000444669 744 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 AL441985.1-201ENST00000457727 251 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 RPS3AP22-201ENST00000488297 769 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 AC008526.1-201ENST00000509149 338 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 AC022080.3-201ENST00000544433 482 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 AC034105.4-201ENST00000568304 277 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 MIR3158-1-201ENST00000583596 81 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 AC005332.10-201ENST00000612725 619 ntBASIC2.03□□□□□ -2.08
KCNIP3Q9Y2W7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 SNORD56.2-201ENST00000363242 71 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 RNU1-51P-201ENST00000365345 176 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 RNU6-395P-201ENST00000365662 106 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AL356057.3-201ENST00000402607 340 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 MTCYBP36-201ENST00000404146 440 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AC137499.1-201ENST00000427602 88 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 RPL23AP30-201ENST00000432419 501 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 EPS15P1-201ENST00000448836 336 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 ZNF114P1-201ENST00000453500 292 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 BTF3P15-201ENST00000455606 336 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 KLF3P2-201ENST00000465138 268 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AC090515.1-201ENST00000465295 476 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AP000797.1-201ENST00000478870 387 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 RPS27P21-201ENST00000486977 252 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AC022493.1-201ENST00000492984 337 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 RPL22P13-201ENST00000493291 347 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 FAM92A1P2-202ENST00000504766 877 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AC005178.1-201ENST00000508392 440 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 RNA5SP341-201ENST00000516261 117 ntBASIC2.02□□□□□ -2.09
KCNIP3Q9Y2W7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms