Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 AL513124.1-201ENST00000450410 614 ntBASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 RPL35AP15-201ENST00000468042 339 ntBASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 AC087190.1-201ENST00000484462 480 ntBASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 AC107032.1-201ENST00000485945 480 ntBASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 RNU6-1212P-201ENST00000517023 104 ntBASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 SYF2P1-201ENST00000550658 413 ntBASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 AC022968.1-201ENST00000567372 442 ntBASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 MIR4715-201ENST00000584117 79 ntBASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
AP4E1Q9UPM8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AC087190.4-201ENST00000574616 8334 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 MIR331-201ENST00000362302 94 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 Y_RNA.277-201ENST00000364754 102 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 RPL21P75-201ENST00000396599 483 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 RPL21P28-201ENST00000401418 483 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 RPL37P18-201ENST00000411602 243 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AL158156.1-201ENST00000422509 473 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AL590556.1-201ENST00000423231 483 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 RPL23AP22-201ENST00000437556 453 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AL138752.1-201ENST00000452964 351 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 RPL21P11-201ENST00000461458 483 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 RPL21P39-201ENST00000463605 483 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 RN7SL738P-201ENST00000470264 297 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 RPL23AP45-201ENST00000476406 468 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AC132942.1-201ENST00000486753 483 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AC093591.1-201ENST00000491435 481 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 RPL21P16-201ENST00000495531 483 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 RNU6-143P-201ENST00000516942 93 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AL590705.4-201ENST00000532209 134 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AC093023.1-201ENST00000547375 507 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 HMGB1P14-201ENST00000557424 591 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 HNRNPCP4-201ENST00000571636 900 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 MIR4330-201ENST00000579077 105 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AC113403.1-201ENST00000604910 193 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AC007390.2-201ENST00000606229 3803 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 uc_338.13-201ENST00000618243 179 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AC116096.1-201ENST00000566804 2314 ntBASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
AP4E1Q9UPM8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 LINC02555-201ENST00000563933 1951 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 Y_RNA.439-201ENST00000384119 94 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 Y_RNA.581-201ENST00000391017 97 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 MIR190B-201ENST00000401119 79 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 MTCYBP2-201ENST00000407745 171 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 RNA5SP146-201ENST00000410743 123 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 AC079780.1-201ENST00000428259 207 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 PHBP16-201ENST00000446318 950 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 RPS29P27-201ENST00000463711 170 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 AL359273.1-201ENST00000510918 627 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 RNU6-255P-201ENST00000516957 105 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 IGLV3-26-201ENST00000520756 302 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 AL121603.1-201ENST00000553815 142 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 AC103996.1-201ENST00000555468 102 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 AL021997.2-201ENST00000615674 271 ntBASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
AP4E1Q9UPM8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 RNU1-15P-201ENST00000353977 144 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 RNA5SP447-201ENST00000363749 119 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 U3.13-201ENST00000364804 214 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 RNY3P4-201ENST00000384428 101 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 Y_RNA.541-201ENST00000384640 113 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms