Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PPARGC1AQ9UBK2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 RLIMP1-201ENST00000339626 1680 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AC138393.1-203ENST00000327086 343 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 MIR412-201ENST00000362142 91 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 SNORD35B-201ENST00000363660 87 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 RNU6-512P-201ENST00000364438 103 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 RNA5SP129-201ENST00000410276 118 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 RNU4-6P-201ENST00000410804 122 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AC091390.3-201ENST00000426478 338 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AL590383.1-201ENST00000428602 75 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 USP9YP30-201ENST00000430729 455 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 OR4C10P-201ENST00000434991 931 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 ANP32BP2-201ENST00000454525 545 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AC011005.2-201ENST00000487324 359 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AL132838.2-201ENST00000492041 314 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 IGKV2-38-201ENST00000517443 247 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AC107016.1-201ENST00000550463 337 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AC007224.1-201ENST00000564410 144 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AL360157.1-201ENST00000565962 87 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AC020914.4-201ENST00000597690 277 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 MIR6868-201ENST00000611215 58 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AL591516.1-201ENST00000611326 274 ntBASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.16□□□□□ -1.74
PPARGC1AQ9UBK2 OTUD4P1-201ENST00000237841 3067 ntBASIC4.15□□□□□ -1.74
PPARGC1AQ9UBK2 ZNF807-201ENST00000328088 1707 ntBASIC4.15□□□□□ -1.74
PPARGC1AQ9UBK2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PPARGC1AQ9UBK2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PPARGC1AQ9UBK2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PPARGC1AQ9UBK2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PPARGC1AQ9UBK2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
PPARGC1AQ9UBK2 Y_RNA.364-201ENST00000365532 101 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-741P-201ENST00000383889 107 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 MIR517A-201ENST00000385001 87 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-1106P-201ENST00000390845 107 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 AL158156.1-201ENST00000422509 473 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 BTF3P15-201ENST00000455606 336 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 RNU7-187P-201ENST00000458985 68 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 SNRPGP3-201ENST00000469405 227 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 AC069499.1-201ENST00000489433 509 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 AC015911.1-201ENST00000495111 156 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 RN7SKP21-201ENST00000516503 220 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 GNAI2P1-201ENST00000541815 315 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 TRAV37-201ENST00000553906 342 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 AL160281.1-201ENST00000605307 311 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 HMGB1P50-201ENST00000605814 607 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 ZYXP1-201ENST00000617638 118 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 MTND4P1-201ENST00000457501 1466 ntBASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PPARGC1AQ9UBK2 MTND5P1-201ENST00000445440 1375 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AL359693.1-201ENST00000614959 2407 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 SPRR2C-201ENST00000290702 219 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 Y_RNA.428-201ENST00000384078 102 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 RNY1P14-201ENST00000384426 108 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 RNU1-89P-201ENST00000384592 164 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AL356057.3-201ENST00000402607 340 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 MIR1251-201ENST00000408552 70 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 RNU2-33P-201ENST00000410344 192 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-55P-201ENST00000411092 107 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms