Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.68□□□□□ -1.82
COL20A1Q9P218 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL20A1Q9P218 Y_RNA.86-201ENST00000363020 111 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 SNORA72.1-201ENST00000363485 129 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 RNU6-434P-201ENST00000384376 107 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 RNU6-393P-201ENST00000384475 107 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 RNU6-1127P-201ENST00000384580 107 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 SNORA1.3-201ENST00000384676 136 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 MIR325-201ENST00000385260 98 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 RNU6-332P-201ENST00000391193 108 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 AL139039.1-201ENST00000401900 692 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.67□□□□□ -1.82
COL20A1Q9P218 RPL21P111-201ENST00000418453 477 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.67□□□□□ -1.82
COL20A1Q9P218 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.67□□□□□ -1.82
COL20A1Q9P218 HMGB3P11-201ENST00000440127 604 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.67□□□□□ -1.82
COL20A1Q9P218 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.67□□□□□ -1.82
COL20A1Q9P218 HMGN2P7-201ENST00000456186 273 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 RNA5SP310-201ENST00000459084 116 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 AC004801.2-202ENST00000463559 283 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.67□□□□□ -1.82
COL20A1Q9P218 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.67□□□□□ -1.82
COL20A1Q9P218 AC079140.5-201ENST00000507882 310 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 AC098799.2-201ENST00000509466 868 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.67□□□□□ -1.82
COL20A1Q9P218 CASP1P1-201ENST00000526345 212 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.67□□□□□ -1.82
COL20A1Q9P218 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.67□□□□□ -1.82
COL20A1Q9P218 MIR548AC-201ENST00000585049 88 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 AC012531.5-201ENST00000611375 151 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 AL157817.1-201ENST00000614264 790 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 AC018692.3-201ENST00000623929 123 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 AF127577.6-201ENST00000623352 2191 ntBASIC3.67□□□□□ -1.82
COL20A1Q9P218 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL20A1Q9P218 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL20A1Q9P218 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.67□□□□□ -1.82
COL20A1Q9P218 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL20A1Q9P218 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL20A1Q9P218 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL20A1Q9P218 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL20A1Q9P218 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL20A1Q9P218 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL20A1Q9P218 Y_RNA.100-201ENST00000363141 102 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 SNORA4.3-201ENST00000365564 137 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 RNU4-20P-201ENST00000365601 151 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 RNU6-395P-201ENST00000365662 106 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 SNORD70.1-201ENST00000391007 85 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 AL078595.1-201ENST00000404458 226 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 ZNF863P-201ENST00000426746 417 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 RPL21P41-201ENST00000459863 264 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 HMGN2P26-201ENST00000463169 339 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 RPL7P47-201ENST00000497299 556 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 Y_RNA.654-201ENST00000497848 106 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 RNA5SP341-201ENST00000516261 117 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 AL157871.3-201ENST00000557231 293 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 UBL5P2-201ENST00000583788 219 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 AC011712.1-201ENST00000588959 234 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 AC136601.2-201ENST00000604356 474 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 Z82243.1-201ENST00000609432 473 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 U2.17-201ENST00000611454 95 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 AC002076.2-201ENST00000617362 122 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 AC100810.6-201ENST00000638068 285 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL20A1Q9P218 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL20A1Q9P218 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL20A1Q9P218 HSPA8P4-201ENST00000511877 1920 ntBASIC3.66□□□□□ -1.82
COL20A1Q9P218 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.66□□□□□ -1.82
COL20A1Q9P218 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.65□□□□□ -1.82
COL20A1Q9P218 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL20A1Q9P218 Y_RNA.33-201ENST00000362591 102 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 RNU6-715P-201ENST00000365204 103 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL20A1Q9P218 Y_RNA.399-201ENST00000383955 105 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 RNU6-140P-201ENST00000384566 108 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 RPS4XP3-201ENST00000398541 413 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 RNU2-68P-201ENST00000410878 191 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 AC096664.2-201ENST00000411843 406 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 MTND5P20-201ENST00000448677 143 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 RPS15AP27-201ENST00000449183 343 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 AC007547.1-201ENST00000462177 490 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 S100A11P2-201ENST00000467589 312 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 SNRPGP3-201ENST00000469405 227 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 AC010486.1-201ENST00000511793 424 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 AC022690.1-201ENST00000526681 550 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms