Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 AC006445.1-201ENST00000491925 405 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 RNU6-123P-201ENST00000516163 102 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 MIR3921-201ENST00000577308 85 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 MIR5195-201ENST00000583555 115 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 AL020991.1-201ENST00000612314 373 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 AC024614.3-201ENST00000637860 256 ntBASIC3.12□□□□□ -1.91
PCDH9Q9HC56 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDH9Q9HC56 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 RNU6-116P-201ENST00000384042 109 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 MIR493-201ENST00000385254 89 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 RN7SKP58-201ENST00000411010 305 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AL513331.1-201ENST00000411908 397 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 OR9R1P-201ENST00000412200 877 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 BMS1P22-201ENST00000414726 313 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AC091390.3-201ENST00000426478 338 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AC006946.1-201ENST00000429106 328 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AC007919.1-201ENST00000429380 217 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 MTATP6P23-201ENST00000440153 476 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AC073415.1-201ENST00000449240 153 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AL118520.1-201ENST00000450770 291 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 GMFBP1-201ENST00000467831 427 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 ADI1P3-201ENST00000549509 470 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 MIR4703-201ENST00000577728 79 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AC012493.2-201ENST00000595083 291 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 NRBF2P5-201ENST00000603087 788 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AC008962.1-201ENST00000605729 304 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AL442067.2-201ENST00000614033 363 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 AC010338.1-201ENST00000621823 717 ntBASIC3.11□□□□□ -1.91
PCDH9Q9HC56 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDH9Q9HC56 SDAD1P2-201ENST00000441308 2028 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 RNA5SP374-201ENST00000362939 125 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 RNY3P3-201ENST00000363816 102 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 RNU6-190P-201ENST00000384154 102 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 RNU6-876P-201ENST00000391295 104 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AC012498.1-201ENST00000424037 437 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 RPL23AP69-201ENST00000431134 458 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 RPL36AP6-201ENST00000435770 321 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 SNRPEP4-201ENST00000435815 279 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 EIF4EP3-201ENST00000498782 656 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 RN7SKP219-201ENST00000516825 296 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 RNU6-677P-201ENST00000516914 101 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AP001804.3-201ENST00000525146 880 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 RANP3-201ENST00000530970 276 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 OR5BN1P-201ENST00000532955 829 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 MIR548S-201ENST00000581352 82 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AC008521.1-201ENST00000587471 187 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AL365204.3-201ENST00000612448 685 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 DISC2.1-201ENST00000612827 205 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AC012409.4-201ENST00000612923 249 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AC007318.2-201ENST00000620999 243 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AC006111.3-201ENST00000622137 383 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 ASNSP3-201ENST00000451989 1306 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 CASC19-280ENST00000642102 1351 ntBASIC3.1□□□□□ -1.91
PCDH9Q9HC56 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PCDH9Q9HC56 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 RNU6-552P-201ENST00000362869 119 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 RNU6-451P-201ENST00000362921 107 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 RNA5SP387-201ENST00000364226 106 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 RNU6-903P-201ENST00000391270 109 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms