Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.14□□□□□ -1.91
UPF2Q9HAU5 CUL1P1-201ENST00000509510 2425 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AC090740.1-201ENST00000623193 2262 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
UPF2Q9HAU5 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
UPF2Q9HAU5 SNORD56.2-201ENST00000363242 71 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 MIR493-201ENST00000385254 89 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AL109755.1-201ENST00000401791 649 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AL136372.1-201ENST00000403060 228 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AL162578.1-201ENST00000406202 378 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AL590002.1-201ENST00000406554 418 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.13□□□□□ -1.91
UPF2Q9HAU5 MTATP6P18-201ENST00000417994 673 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.13□□□□□ -1.91
UPF2Q9HAU5 MTATP6P4-201ENST00000427725 675 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AC093106.2-201ENST00000428212 385 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 MTND1P2-201ENST00000430604 821 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.13□□□□□ -1.91
UPF2Q9HAU5 RPL26P6-201ENST00000440913 438 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AL671855.1-201ENST00000446875 1203 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AC108059.3-201ENST00000456388 214 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.13□□□□□ -1.91
UPF2Q9HAU5 RPS29P25-201ENST00000481709 171 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.13□□□□□ -1.91
UPF2Q9HAU5 Y_RNA.693-201ENST00000516641 110 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AL133241.1-201ENST00000556832 487 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AC005951.2-201ENST00000576282 495 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AP002826.1-201ENST00000608835 315 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AC009570.1-201ENST00000609599 745 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 SNHG22-203ENST00000617833 660 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 AC009161.2-201ENST00000624626 138 ntBASIC3.13□□□□□ -1.91
UPF2Q9HAU5 ZNF271P-202ENST00000465539 1970 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UPF2Q9HAU5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UPF2Q9HAU5 RNY4P14-201ENST00000363656 96 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 RNU1-140P-201ENST00000365040 165 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 U8.8-201ENST00000365399 135 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 Y_RNA.367-201ENST00000365544 101 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 RNU6-483P-201ENST00000384088 108 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 RNU6-432P-201ENST00000384196 109 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 SNORA9-201ENST00000384215 133 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 RNU6-456P-201ENST00000384493 107 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 MIR491-201ENST00000384877 84 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 RNU6-1158P-201ENST00000391167 107 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 AC080125.1-201ENST00000414888 684 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 RPLP0P7-201ENST00000416050 667 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 UBE2FP1-201ENST00000416536 447 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.12□□□□□ -1.91
UPF2Q9HAU5 AL139132.1-201ENST00000431587 344 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 AC000111.3-201ENST00000433478 193 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.12□□□□□ -1.91
UPF2Q9HAU5 SNRPGP6-201ENST00000451124 220 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.12□□□□□ -1.91
UPF2Q9HAU5 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.12□□□□□ -1.91
UPF2Q9HAU5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.12□□□□□ -1.91
UPF2Q9HAU5 AC092989.1-201ENST00000481235 277 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 AC026427.2-201ENST00000506228 536 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 AC104383.1-201ENST00000530297 370 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.12□□□□□ -1.91
UPF2Q9HAU5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.12□□□□□ -1.91
UPF2Q9HAU5 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 MIR6076-201ENST00000617521 113 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 AC139792.3-201ENST00000623525 224 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
UPF2Q9HAU5 MTCO1P9-201ENST00000505577 1534 ntBASIC3.12□□□□□ -1.91
UPF2Q9HAU5 RNU6-188P-201ENST00000364207 107 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 RNU1-112P-201ENST00000364401 164 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 RNU5E-6P-201ENST00000365574 115 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.11□□□□□ -1.91
UPF2Q9HAU5 SNORA18.3-201ENST00000384122 132 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 MIR558-201ENST00000384920 94 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 RPS4XP3-201ENST00000398541 413 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AL359634.1-202ENST00000404721 284 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 USP9YP6-201ENST00000413550 854 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 CCDC58P2-201ENST00000417131 366 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 ATG3P1-201ENST00000419507 911 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.11□□□□□ -1.91
UPF2Q9HAU5 TMEM167AP1-201ENST00000423409 219 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.11□□□□□ -1.91
UPF2Q9HAU5 GPR143P-201ENST00000434155 205 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 MTATP6P16-201ENST00000434543 526 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 RPL23AP83-201ENST00000434984 473 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AL049714.1-201ENST00000466686 347 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AC010631.1-201ENST00000474150 156 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 RPL30P14-201ENST00000482744 348 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AC023194.1-201ENST00000493084 308 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AIG1P1-201ENST00000503376 148 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 VN1R104P-201ENST00000505115 1009 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 HIGD1AP13-201ENST00000509878 289 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 RNA5SP341-201ENST00000516261 117 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 SNORD27.1-201ENST00000516319 72 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms