Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 RNU6-1078P-201ENST00000364522 103 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 Y_RNA.373-201ENST00000365600 103 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 RNU6-805P-201ENST00000365643 106 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 Y_RNA.445-201ENST00000384168 102 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 RNU6-1297P-201ENST00000384415 104 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 MIR454-201ENST00000390180 115 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 RNU6-328P-201ENST00000390887 106 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 RNY4P36-201ENST00000391116 96 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 RNU6-903P-201ENST00000391270 109 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AL356057.3-201ENST00000402607 340 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AL359634.1-202ENST00000404721 284 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 RNU4-26P-201ENST00000410270 107 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 Y_RNA.605-201ENST00000410577 105 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 RNU2-37P-201ENST00000410695 177 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 MTCO2P27-201ENST00000420740 428 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AL358176.2-201ENST00000425769 204 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 RPL32P28-201ENST00000443577 397 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 PRPS1P1-201ENST00000445305 876 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AL118520.1-201ENST00000450770 291 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 RNU6-1208P-201ENST00000459588 107 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AP001486.1-201ENST00000463339 476 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AC078817.1-201ENST00000492623 435 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AC110794.1-201ENST00000505816 425 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AC105417.1-201ENST00000514691 285 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 RNU6-1038P-201ENST00000516516 104 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 RNU6-1088P-201ENST00000516850 104 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AC011979.2-201ENST00000527568 352 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AP000857.1-201ENST00000532151 543 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 MIR5004-201ENST00000579078 107 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 MIR4325-201ENST00000583049 90 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AC019193.3-201ENST00000609144 554 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.46□□□□□ -1.86
EBF3Q9H4W6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
EBF3Q9H4W6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AC068647.1-201ENST00000489539 2265 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AL139276.1-201ENST00000311910 1001 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 RNU6-552P-201ENST00000362869 119 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 Y_RNA.100-201ENST00000363141 102 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 U3.11-201ENST00000364476 212 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 RNU4-66P-201ENST00000365199 138 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 MIR568-201ENST00000385036 95 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 SNORD37.1-201ENST00000390968 65 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 UBE2V1P2-201ENST00000397758 440 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 EI24P2-201ENST00000397776 1076 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 RNU2-47P-201ENST00000410649 186 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 Z99755.1-201ENST00000414048 380 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 RPL35AP22-201ENST00000436855 335 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AL049873.1-201ENST00000480540 376 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 RNU6-864P-201ENST00000516256 108 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 RNU1-103P-201ENST00000516502 125 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 MIR2276-201ENST00000516886 89 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 APOOP3-201ENST00000536787 586 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 CR383656.7-201ENST00000548164 174 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AL133153.1-201ENST00000557756 303 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 ZNF192P1-203ENST00000565888 810 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 MIR4775-201ENST00000581168 75 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AL162274.2-201ENST00000614406 332 ntBASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms