Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RPS24P1-201ENST00000438550 371 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.81□□□□□ -1.96
CDCA3Q99618 DDX3P2-201ENST00000446138 111 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 MTCO2P7-201ENST00000446518 666 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 AC079448.1-201ENST00000449377 373 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 snoU13.15-201ENST00000459407 104 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.81□□□□□ -1.96
CDCA3Q99618 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.81□□□□□ -1.96
CDCA3Q99618 SNORA31.1-201ENST00000515993 133 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 SNORA31.5-201ENST00000516190 133 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 RNU6-405P-201ENST00000516637 110 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 SNORD59.2-201ENST00000516873 68 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 RNA5SP290-201ENST00000517133 127 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 RNU6-711P-201ENST00000517255 106 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 MTCO2P4-201ENST00000517968 247 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 AC090572.1-201ENST00000519251 160 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.81□□□□□ -1.96
CDCA3Q99618 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.81□□□□□ -1.96
CDCA3Q99618 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.81□□□□□ -1.96
CDCA3Q99618 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.81□□□□□ -1.96
CDCA3Q99618 AL391840.1-201ENST00000571144 367 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 MIR4524B-201ENST00000581569 115 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 AC098826.3-201ENST00000603823 466 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 AC104073.3-201ENST00000610942 955 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDCA3Q99618 AC099842.1-201ENST00000619919 596 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.81□□□□□ -1.96
CDCA3Q99618 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDCA3Q99618 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDCA3Q99618 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CDCA3Q99618 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDCA3Q99618 AL355596.1-201ENST00000565399 3996 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDCA3Q99618 AP003122.5-201ENST00000527668 3766 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 AC092447.7-201ENST00000422212 1621 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 RNU6-181P-201ENST00000363225 107 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 RNU6-270P-201ENST00000364131 105 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 Y_RNA.245-201ENST00000364493 95 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDCA3Q99618 RNU6-1042P-201ENST00000384204 107 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 RNU6-140P-201ENST00000384566 108 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 MIR558-201ENST00000384920 94 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CDCA3Q99618 RNA5SP252-201ENST00000391131 119 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 RPS4XP7-201ENST00000406274 780 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 RNU2-39P-201ENST00000410604 198 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 AL589823.1-201ENST00000429577 183 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.8□□□□□ -1.96
CDCA3Q99618 RPL23AP30-201ENST00000432419 501 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.8□□□□□ -1.96
CDCA3Q99618 AC112220.1-201ENST00000434628 355 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDCA3Q99618 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.8□□□□□ -1.96
CDCA3Q99618 MTCYBP1-201ENST00000454315 1119 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 snoU13.28-201ENST00000459235 104 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 RPL37P6-201ENST00000460682 294 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.8□□□□□ -1.96
CDCA3Q99618 RNU6-445P-201ENST00000516949 107 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 AC109329.2-201ENST00000519658 482 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.8□□□□□ -1.96
CDCA3Q99618 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.8□□□□□ -1.96
CDCA3Q99618 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.8□□□□□ -1.96
CDCA3Q99618 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.8□□□□□ -1.96
CDCA3Q99618 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.8□□□□□ -1.96
CDCA3Q99618 AC091805.2-201ENST00000603848 235 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 Z84480.1-201ENST00000605131 311 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 AC005332.10-201ENST00000612725 619 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 AL138880.2-201ENST00000616214 239 ntBASIC2.8□□□□□ -1.96
CDCA3Q99618 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CDCA3Q99618 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.8□□□□□ -1.96
CDCA3Q99618 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.79□□□□□ -1.96
CDCA3Q99618 Y_RNA.22-201ENST00000362492 102 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 RNU6-641P-201ENST00000384006 107 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 RNU6-1035P-201ENST00000384477 107 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 RNA5SP425-201ENST00000410336 112 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 MTCO3P41-201ENST00000414801 328 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 MED13P1-201ENST00000428342 171 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 CECR9-201ENST00000453421 199 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.79□□□□□ -1.96
CDCA3Q99618 C1DP4-201ENST00000455429 424 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 AC010099.1-201ENST00000455434 375 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 AL031183.1-201ENST00000457667 207 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 AC093899.1-201ENST00000457984 376 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 AC090525.1-201ENST00000479116 478 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 AC007182.2-201ENST00000489251 402 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 AC138853.1-201ENST00000503549 823 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.79□□□□□ -1.96
CDCA3Q99618 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.79□□□□□ -1.96
CDCA3Q99618 AP000867.2-201ENST00000532468 320 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.79□□□□□ -1.96
CDCA3Q99618 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.79□□□□□ -1.96
CDCA3Q99618 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.79□□□□□ -1.96
CDCA3Q99618 AGGF1P4-201ENST00000568249 801 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.79□□□□□ -1.96
CDCA3Q99618 MIR3605-201ENST00000583214 100 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 AC098848.2-201ENST00000588023 330 ntBASIC2.79□□□□□ -1.96
CDCA3Q99618 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
CDCA3Q99618 AC007621.1-201ENST00000604544 437 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms