Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU6-798P-201ENST00000516912 103 ntBASIC1.22□□□□□ -2.21
IFT140Q96RY7 SNORA48.10-201ENST00000516965 160 ntBASIC1.22□□□□□ -2.21
IFT140Q96RY7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.22□□□□□ -2.21
IFT140Q96RY7 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.22□□□□□ -2.21
IFT140Q96RY7 LINC00933-203ENST00000559812 219 ntBASIC1.22□□□□□ -2.21
IFT140Q96RY7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.22□□□□□ -2.21
IFT140Q96RY7 CYP4A27P-201ENST00000567218 190 ntBASIC1.22□□□□□ -2.21
IFT140Q96RY7 AC055876.5-201ENST00000605667 259 ntBASIC1.22□□□□□ -2.21
IFT140Q96RY7 AL592148.2-201ENST00000612210 372 ntBASIC1.22□□□□□ -2.21
IFT140Q96RY7 RN7SKP158-201ENST00000410453 326 ntBASIC1.21□□□□□ -2.22
IFT140Q96RY7 UBE2FP1-201ENST00000416536 447 ntBASIC1.21□□□□□ -2.22
IFT140Q96RY7 MTND4LP10-201ENST00000435146 291 ntBASIC1.21□□□□□ -2.22
IFT140Q96RY7 AL049714.1-201ENST00000466686 347 ntBASIC1.21□□□□□ -2.22
IFT140Q96RY7 AC104164.3-201ENST00000467363 1258 ntBASIC1.21□□□□□ -2.22
IFT140Q96RY7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.21□□□□□ -2.22
IFT140Q96RY7 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
IFT140Q96RY7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.21□□□□□ -2.22
IFT140Q96RY7 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.21□□□□□ -2.22
IFT140Q96RY7 RNU6-202P-201ENST00000515998 96 ntBASIC1.21□□□□□ -2.22
IFT140Q96RY7 RNU6-351P-201ENST00000516097 100 ntBASIC1.21□□□□□ -2.22
IFT140Q96RY7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.21□□□□□ -2.22
IFT140Q96RY7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.21□□□□□ -2.22
IFT140Q96RY7 AC118273.2-201ENST00000532092 465 ntBASIC1.21□□□□□ -2.22
IFT140Q96RY7 MIR4529-201ENST00000578110 78 ntBASIC1.21□□□□□ -2.22
IFT140Q96RY7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
IFT140Q96RY7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
IFT140Q96RY7 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.21□□□□□ -2.22
IFT140Q96RY7 AC010329.5-201ENST00000623497 2174 ntBASIC1.21□□□□□ -2.22
IFT140Q96RY7 RNA5SP347-201ENST00000362445 119 ntBASIC1.2□□□□□ -2.22
IFT140Q96RY7 AL109913.1-201ENST00000421173 514 ntBASIC1.2□□□□□ -2.22
IFT140Q96RY7 AC099548.1-201ENST00000421443 426 ntBASIC1.2□□□□□ -2.22
IFT140Q96RY7 RPS20P24-201ENST00000457473 361 ntBASIC1.2□□□□□ -2.22
IFT140Q96RY7 RPS20P20-201ENST00000460498 340 ntBASIC1.2□□□□□ -2.22
IFT140Q96RY7 SUMO1P1-201ENST00000497904 306 ntBASIC1.2□□□□□ -2.22
IFT140Q96RY7 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.2□□□□□ -2.22
IFT140Q96RY7 SNORA31.13-201ENST00000516624 135 ntBASIC1.2□□□□□ -2.22
IFT140Q96RY7 AC010186.2-204ENST00000537668 439 ntBASIC1.2□□□□□ -2.22
IFT140Q96RY7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.2□□□□□ -2.22
IFT140Q96RY7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.2□□□□□ -2.22
IFT140Q96RY7 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.2□□□□□ -2.22
IFT140Q96RY7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.2□□□□□ -2.22
IFT140Q96RY7 RNU6-730P-201ENST00000383954 104 ntBASIC1.19□□□□□ -2.22
IFT140Q96RY7 RNU6-441P-201ENST00000384545 106 ntBASIC1.19□□□□□ -2.22
IFT140Q96RY7 AC093106.2-201ENST00000428212 385 ntBASIC1.19□□□□□ -2.22
IFT140Q96RY7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.19□□□□□ -2.22
IFT140Q96RY7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.19□□□□□ -2.22
IFT140Q96RY7 AK3P2-201ENST00000507976 429 ntBASIC1.19□□□□□ -2.22
IFT140Q96RY7 CYCSP23-201ENST00000519781 313 ntBASIC1.19□□□□□ -2.22
IFT140Q96RY7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
IFT140Q96RY7 AC093838.1-201ENST00000613014 469 ntBASIC1.19□□□□□ -2.22
IFT140Q96RY7 AP003476.1-201ENST00000623984 516 ntBASIC1.19□□□□□ -2.22
IFT140Q96RY7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
IFT140Q96RY7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
IFT140Q96RY7 RNA5SP125-201ENST00000364843 120 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 MIR1197-201ENST00000408818 88 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 MRPL35P3-201ENST00000421557 364 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.18□□□□□ -2.22
IFT140Q96RY7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.18□□□□□ -2.22
IFT140Q96RY7 AL035410.1-201ENST00000427409 427 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 AC016691.1-201ENST00000441321 413 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.18□□□□□ -2.22
IFT140Q96RY7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.18□□□□□ -2.22
IFT140Q96RY7 SUMO2P2-201ENST00000456482 255 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 AC117503.1-201ENST00000472241 394 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 RNU6-1095P-201ENST00000516148 108 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 SNORA48.11-201ENST00000517015 89 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 AC022616.2-201ENST00000523185 300 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.18□□□□□ -2.22
IFT140Q96RY7 AC243829.3-201ENST00000622177 108 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 AL118508.4-201ENST00000624142 1176 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 OR5H6-203ENST00000642105 978 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 RNA5SP499-201ENST00000363982 119 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 RNU6-272P-201ENST00000411028 104 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 AC096920.1-201ENST00000423991 241 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.18□□□□□ -2.22
IFT140Q96RY7 RNU5F-8P-201ENST00000515941 111 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.18□□□□□ -2.22
IFT140Q96RY7 AC018926.3-201ENST00000618841 406 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 AC068057.2-201ENST00000624047 895 ntBASIC1.18□□□□□ -2.22
IFT140Q96RY7 AC007785.2-201ENST00000598627 1916 ntBASIC1.17□□□□□ -2.22
IFT140Q96RY7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
IFT140Q96RY7 RN7SKP61-201ENST00000410642 295 ntBASIC1.17□□□□□ -2.22
IFT140Q96RY7 OR9R1P-201ENST00000412200 877 ntBASIC1.17□□□□□ -2.22
IFT140Q96RY7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.17□□□□□ -2.22
IFT140Q96RY7 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.17□□□□□ -2.22
IFT140Q96RY7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.17□□□□□ -2.22
IFT140Q96RY7 AC008834.1-201ENST00000511612 175 ntBASIC1.17□□□□□ -2.22
IFT140Q96RY7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.17□□□□□ -2.22
IFT140Q96RY7 U6.107-201ENST00000637108 79 ntBASIC1.17□□□□□ -2.22
IFT140Q96RY7 ELL2P3-201ENST00000457883 1602 ntBASIC1.17□□□□□ -2.22
IFT140Q96RY7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
IFT140Q96RY7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
IFT140Q96RY7 RPL30P13-201ENST00000418873 348 ntBASIC1.16□□□□□ -2.22
IFT140Q96RY7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.16□□□□□ -2.22
IFT140Q96RY7 DDX3P2-201ENST00000446138 111 ntBASIC1.16□□□□□ -2.22
IFT140Q96RY7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.16□□□□□ -2.22
IFT140Q96RY7 AC104073.1-201ENST00000451988 151 ntBASIC1.16□□□□□ -2.22
IFT140Q96RY7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.16□□□□□ -2.22
IFT140Q96RY7 AC025857.1-201ENST00000525252 377 ntBASIC1.16□□□□□ -2.22
IFT140Q96RY7 DEFB108D-201ENST00000527787 222 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms