Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 AP005639.2-201ENST00000527592 928 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 Y_RNA.447-201ENST00000384184 113 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 RNU6-45P-201ENST00000384471 107 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 RNU6-1263P-201ENST00000384601 106 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 MIR938-201ENST00000401216 83 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 RNU4-65P-201ENST00000410473 140 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 PRPS1P1-201ENST00000445305 876 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 OR2A41P-201ENST00000473586 105 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 Y_RNA.684-201ENST00000516510 99 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 AC026371.1-201ENST00000551867 419 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 MIR365A-201ENST00000362260 87 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 RNU4-32P-201ENST00000363404 141 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 RNY3P5-201ENST00000384127 102 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 NF1P3-201ENST00000457709 450 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 CYCTP-201ENST00000504253 315 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 RNU6-567P-201ENST00000516746 107 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 AP006587.4-201ENST00000526053 529 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 AL590705.4-201ENST00000532209 134 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 MIR378F-201ENST00000578143 78 ntBASIC0.29□□□□□ -2.36
CSMD1Q96PZ7 SNORD49B-201ENST00000365172 72 ntBASIC0.28□□□□□ -2.36
CSMD1Q96PZ7 MIR10B-201ENST00000385011 110 ntBASIC0.28□□□□□ -2.36
CSMD1Q96PZ7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.28□□□□□ -2.36
CSMD1Q96PZ7 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.28□□□□□ -2.36
CSMD1Q96PZ7 SNORD115-41-201ENST00000363608 82 ntBASIC0.28□□□□□ -2.36
CSMD1Q96PZ7 AC016717.1-201ENST00000448918 286 ntBASIC0.28□□□□□ -2.36
CSMD1Q96PZ7 AC138853.1-201ENST00000503549 823 ntBASIC0.28□□□□□ -2.36
CSMD1Q96PZ7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.28□□□□□ -2.36
CSMD1Q96PZ7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.28□□□□□ -2.36
CSMD1Q96PZ7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.28□□□□□ -2.36
CSMD1Q96PZ7 MIR4645-201ENST00000583158 77 ntBASIC0.28□□□□□ -2.36
CSMD1Q96PZ7 AL138726.1-201ENST00000614873 333 ntBASIC0.28□□□□□ -2.36
CSMD1Q96PZ7 SNORA25.8-201ENST00000364831 128 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC097463.2-201ENST00000421074 142 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC241520.1-201ENST00000422654 1099 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC010683.1-201ENST00000473673 378 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 FAM60BP-201ENST00000578364 658 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AL669831.4-202ENST00000590817 238 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC245047.4-201ENST00000433189 144 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 TPTE2P6-202ENST00000445572 1007 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC069277.2-201ENST00000454211 432 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 OR5H4P-201ENST00000510851 923 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC090115.3-201ENST00000553218 849 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC090616.3-201ENST00000582184 217 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 FAM60CP-201ENST00000591086 664 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC112487.2-201ENST00000637950 304 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 Y_RNA.203-201ENST00000364106 102 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 HMGN2P22-201ENST00000427588 175 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC004383.1-201ENST00000438135 289 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 SNORA31.18-201ENST00000517043 134 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 AC008163.1-202ENST00000636004 2889 ntBASIC0.27□□□□□ -2.37
CSMD1Q96PZ7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 Y_RNA.65-201ENST00000362846 100 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 BTF3L4P2-201ENST00000392798 346 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 RPS3AP36-201ENST00000398190 775 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 TMEM167AP1-201ENST00000423409 219 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 FAM157B-203ENST00000639350 358 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 SNORA36.1-201ENST00000363424 132 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 RNU6-833P-201ENST00000363486 107 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 MTND4LP13-201ENST00000425022 298 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 AC012254.4-201ENST00000588843 273 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 AC106800.4-201ENST00000614905 153 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 RNU6-989P-201ENST00000362756 107 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 MIR607-201ENST00000385241 96 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 RNU6-1064P-201ENST00000410626 104 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 RPL23AP3-201ENST00000453844 468 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 MTCO3P35-201ENST00000485582 781 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 UBL5P1-201ENST00000507979 193 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 IGKV1-22-201ENST00000524313 326 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 AC135507.1-201ENST00000607214 561 ntBASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.26□□□□□ -2.37
CSMD1Q96PZ7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms